STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000043837Solute carrier family 30 member 1a. (534 aa)    
Predicted Functional Partners:
ENSCHAP00000020676
Solute carrier family 39 member 10.
  
 0.644
ENSCHAP00000020007
annotation not available
  
 0.572
ENSCHAP00000005895
annotation not available
   
 0.571
ENSCHAP00000026384
Solute carrier family 39 member 13.
   
 0.569
slc39a14
Solute carrier family 39 member 14.
  
 0.564
ENSCHAP00000052347
annotation not available
  
 0.562
ENSCHAP00000006532
Solute carrier family 39 member 6.
  
 0.554
slc30a6
Solute carrier family 30 member 6.
    
 
 0.540
ENSCHAP00000011826
Solute carrier family 30 member 9.
  
 
 0.532
LOC105911417
Zinc transporter ZIP8-like.
  
 0.489
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.