STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ltc4sLeukotriene C4 synthase. (148 aa)    
Predicted Functional Partners:
lta4h
Leukotriene A4 hydrolase.
     
 0.906
gsto1
Glutathione S-transferase omega 1.
     
 0.884
alox5
Arachidonate 5-lipoxygenase.
     
 0.861
ENSCHAP00000000404
Si:dkey-222h21.12.
     
 0.855
ENSCHAP00000000728
Gamma-glutamyltransferase 5a.
     
 0.855
LOC105889029
Gamma-glutamyltranspeptidase 1-like.
     
 0.855
LOC105888718
Gamma-glutamyltransferase 5-like.
     
 0.855
ENSCHAP00000058276
Arachidonate 12-lipoxygenase.
     
 0.839
ENSCHAP00000002569
Glutathione synthetase.
   
 
 0.837
gsr
Glutathione-disulfide reductase.
     
 0.834
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.