STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
commd7COMM domain containing 7. (200 aa)    
Predicted Functional Partners:
COMMD10
COMM domain containing 10.
   
 0.979
commd6
COMM domain containing 6.
   
 0.965
ENSCHAP00000029762
COMM domain containing 8.
    
 0.964
ENSCHAP00000056705
Coiled-coil domain containing 22.
    
 0.959
ENSCHAP00000008719
COMM domain containing 4.
    
 0.957
ENSCHAP00000028527
Copper metabolism (Murr1) domain containing 1.
    
 0.956
commd3
COMM domain containing 3.
   
 0.952
ENSCHAP00000051271
COMM domain containing 5.
   
 0.927
commd9
COMM domain containing 9.
   
 0.859
vps29
VPS29 retromer complex component.
   
 
 0.839
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.