STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000044536Signal sequence receptor, beta. (184 aa)    
Predicted Functional Partners:
ENSCHAP00000026362
Signal sequence receptor, delta.
   
 0.998
ssr3
Signal sequence receptor subunit 3.
   
 0.998
sec61b
SEC61 translocon beta subunit.
   
 0.987
ssr1
Signal sequence receptor subunit 1.
   
 0.986
LOC105895914
Translocon-associated protein subunit alpha-like.
   
 0.980
ddost
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase non-catalytic subunit.
   
  0.904
ENSCHAP00000044723
annotation not available
   
 
 0.883
ostc
Oligosaccharyltransferase complex non-catalytic subunit.
   
 
 0.860
rpn1
Ribophorin I.
   
 0.838
rpn2
Ribophorin II.
   
  0.818
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.