STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000044661Fumarate hydratase. (561 aa)    
Predicted Functional Partners:
LOC105909048
Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial.
 
 0.997
suclg1
succinate-CoA ligase alpha subunit.
  
 0.995
ENSCHAP00000016319
succinate-CoA ligase, ADP-forming, beta subunit.
  
 0.989
idh3a
Isocitrate dehydrogenase (NAD(+)) 3 catalytic subunit alpha.
  
 
 0.985
DLST
Dihydrolipoamide S-succinyltransferase.
  
 0.985
ENSCHAP00000043949
Dihydrolipoamide dehydrogenase.
  
 0.984
LOC105912765
Dihydrolipoyl dehydrogenase, mitochondrial-like.
  
 0.984
mdh2
Malate dehydrogenase 2.
  
 0.982
SDHB
Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial.
  
 0.981
sdhc
Succinate dehydrogenase complex subunit C.
  
 
 0.981
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.