STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000044689Si:dkey-17m8.1. (916 aa)    
Predicted Functional Partners:
ENSCHAP00000004804
Mitogen-activated protein kinase kinase 7.
    
 0.885
ENSCHAP00000011036
ADP-ribosylation factor 6a.
    
 0.838
ENSCHAP00000028614
annotation not available
   
 0.739
LOC105907444
Mitogen-activated protein kinase 9-like.
   
 0.739
ENSCHAP00000003216
Mitogen-activated protein kinase 8b.
   
 0.710
LOC105904364
Mitogen-activated protein kinase 8B.
   
 0.710
ENSCHAP00000045542
Mitogen-activated protein kinase 10.
   
 0.710
ENSCHAP00000021041
ADP-ribosylation factor-like 15b.
    
 0.689
ENSCHAP00000056533
ADP-ribosylation factor-like 15a.
    
 0.689
abl1
ABL proto-oncogene 1, non-receptor tyrosine kinase.
    
  0.648
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.