STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tbx21T-box transcription factor 21. (631 aa)    
Predicted Functional Partners:
gata3
GATA binding protein 3.
   
 0.931
ENSCHAP00000047444
GATA binding protein 2a.
   
 0.912
runx2
RUNX family transcription factor 2.
   
 0.839
ENSCHAP00000021090
RUNX family transcription factor 2b.
   
 0.839
LOC105896069
Runt-related transcription factor 3-like.
   
 0.839
ENSCHAP00000061282
annotation not available
   
  
 0.601
ENSCHAP00000042950
Interleukin 2 receptor, beta.
   
  
 0.580
hlx
H2.0 like homeobox.
    
 
 0.564
ENSCHAP00000030568
Forkhead box P3a.
    
 
 0.544
ENSCHAP00000056015
Interleukin 12 receptor, beta 2a.
   
  
 0.541
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.