STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc17a9Solute carrier family 17 member 9. (465 aa)    
Predicted Functional Partners:
RIMS2
Regulating synaptic membrane exocytosis 2.
     
 0.772
RIMS2-2
Regulating synaptic membrane exocytosis 2.
     
 0.772
ccdc47
Coiled-coil domain containing 47.
   
 
  0.611
slc18a3
Solute carrier family 18 member A3.
     
 0.592
SLC18A3
Probable vesicular acetylcholine transporter-A.
     
 0.592
ENSCHAP00000008118
Vesicle-associated membrane protein 2.
   
 
 0.571
ENSCHAP00000048391
annotation not available
   
 
 0.571
ENSCHAP00000009922
Synaptotagmin IIa.
     
 0.555
slc32a1
Solute carrier family 32 member 1.
     
 0.555
ENSCHAP00000028667
Synaptotagmin Vb.
     
 0.555
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.