STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000045351Si:ch211-264e16.1. (1065 aa)    
Predicted Functional Partners:
gne
Glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase.
    
 0.880
ENSCHAP00000056701
UDP-N-acetylglucosamine pyrophosphorylase 1.
   
 
 0.879
uap1l1
UDP-N-acetylglucosamine pyrophosphorylase 1 like 1.
   
 
 0.877
ddx21
DExD-box helicase 21.
  
  
 
0.853
ENSCHAP00000028697
annotation not available
  
 
 0.785
ENSCHAP00000062284
UDP-glucose 6-dehydrogenase.
  
 
 0.785
ENSCHAP00000007184
Lysine (K)-specific demethylase 6B, b.
  
 0.771
ENSCHAP00000032575
Lysine (K)-specific demethylase 6B, a.
  
 0.771
ENSCHAP00000047368
Lysine (K)-specific demethylase 6A.
  
 0.771
ENSCHAP00000027338
2-hydroxyacyl-CoA lyase 1.
  
 
 0.728
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.