STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000045368Coiled-coil domain containing 77. (506 aa)    
Predicted Functional Partners:
aldh7a1
Aldehyde dehydrogenase 7 family member A1.
   
 
 0.574
ENSCHAP00000001703
Ureidopropionase, beta.
    
 0.551
ENSCHAP00000001600
Solute carrier family 13 member 5a.
    
 0.538
ENSCHAP00000001801
Solute carrier family 13 member 3.
    
 0.538
ENSCHAP00000012858
Solute carrier family 13 member 5b.
    
 0.538
ENSCHAP00000019198
Solute carrier family 13 member 4.
    
 0.538
SLC13A2
Solute carrier family 13 member 2.
    
 0.538
LOC105896221
Solute carrier family 13 member 2-like.
    
 0.538
ENSCHAP00000052768
Solute carrier family 13 member 1.
    
 0.538
ENSCHAP00000051223
Alanine--glyoxylate aminotransferase 2.
  
 
 0.523
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.