STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000045443annotation not available (972 aa)    
Predicted Functional Partners:
ENSCHAP00000017711
annotation not available
   
 0.521
ENSCHAP00000002282
Regulatory factor X, 5.
    
 0.501
rps27a
Ribosomal protein S27a.
    
  0.500
ENSCHAP00000009160
RAN binding protein 2.
   
 
  0.489
rfxank
Regulatory factor X associated ankyrin containing protein.
    
 0.471
sugt1
SGT1 homolog, MIS12 kinetochore complex assembly cochaperone.
    
 0.471
ENSCHAP00000030291
Ubiquitin B.
    
  0.466
ENSCHAP00000024796
BRCA1/BRCA2-containing complex, subunit 3.
    
  0.461
ripk2
Receptor interacting serine/threonine kinase 2.
   
 0.459
ENSCHAP00000058704
Adhesion G protein-coupled receptor G1.
   
 0.459
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.