STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tbccTubulin folding cofactor C. (354 aa)    
Predicted Functional Partners:
tbcd
Tubulin folding cofactor D.
    
 0.929
tbce
Tubulin folding cofactor E.
    
 0.929
LOC105908595
ADP-ribosylation factor-like protein 3.
    
 0.928
ENSCHAP00000002959
annotation not available
    
 0.909
ENSCHAP00000001087
ADP ribosylation factor like GTPase 3, like 2.
    
 0.884
ENSCHAP00000013410
ADP ribosylation factor like GTPase 3, like 1.
    
 0.884
ap2s1
Adaptor related protein complex 2 subunit sigma 1.
   
 
  0.785
unc119b
Unc-119 lipid binding chaperone B.
     
 0.713
ENSCHAP00000012750
annotation not available
     
 0.713
LOC105895571
ADP-ribosylation factor-like protein 2.
    
 
 0.682
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
Server load: low (26%) [HD]