STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000045890Immunoglobulin superfamily, member 8. (623 aa)    
Predicted Functional Partners:
cd9
CD9 molecule.
    
 
 0.817
ENSCHAP00000044280
CD9 molecule a.
    
 
 0.817
tspan3
Tetraspanin 3.
    
 
 0.639
cd81
CD81 molecule.
    
 
 0.607
LOC105905136
CD81 antigen-like.
    
 
 0.607
tspan7
Tetraspanin 7.
    
 
 0.567
ENSCHAP00000048355
Ornithine decarboxylase antizyme 2b.
      
 0.527
ENSCHAP00000026560
annotation not available
    
 
 0.519
ENSCHAP00000041518
CD82 molecule b.
    
 
 0.519
acbd6
acyl-CoA binding domain containing 6.
      
 0.515
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.