STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000046123ATPase copper transporting beta. (1357 aa)    
Predicted Functional Partners:
ccs
Copper chaperone for superoxide dismutase.
  
 0.997
ENSCHAP00000045045
Antioxidant 1 copper chaperone.
    
 0.988
cp
Ceruloplasmin.
  
 
 0.768
ENSCHAP00000016431
Coagulation factor VIII, procoagulant component.
  
 
 0.750
ENSCHAP00000036487
EGF-like repeats and discoidin I-like domains 3a.
  
 
 0.750
ENSCHAP00000038676
annotation not available
  
 
 0.750
LOC105890472
Hephaestin-like protein 1.
  
 
 0.750
ENSCHAP00000049776
Coagulation factor V.
  
 
 0.750
RS1
Retinoschisin-like.
  
 
 0.749
ENSCHAP00000042124
Neuropilin 2a.
  
 
 0.749
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.