STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000046172annotation not available (813 aa)    
Predicted Functional Partners:
cpt2
Carnitine palmitoyltransferase 2.
  
 
0.863
ENSCHAP00000062707
acetyl-CoA carboxylase beta.
     
 0.846
ENSCHAP00000045717
acyl-CoA synthetase long chain family member 2.
     
 0.838
ENSCHAP00000058001
annotation not available
     
 0.838
acsbg2
acyl-CoA synthetase bubblegum family member 2.
     
 0.835
LOC105907541
long-chain-fatty-acid--CoA ligase ACSBG2-like.
     
 0.835
acsbg1
acyl-CoA synthetase bubblegum family member 1.
     
 0.832
LOC105904504
Carnitine O-palmitoyltransferase 1, liver isoform-like.
  
  
 
0.802
ENSCHAP00000013545
Carnitine palmitoyltransferase 1B (muscle).
  
  
 
0.779
LOC105893204
long-chain-fatty-acid--CoA ligase 4-like.
   
 
 0.739
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.