STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000046313annotation not available (92 aa)    
Predicted Functional Partners:
ENSCHAP00000060905
annotation not available
     
0.813
PTPRC
Protein tyrosine phosphatase receptor type C.
    
 
 0.573
ENSCHAP00000049773
FAM20A golgi associated secretory pathway pseudokinase.
    
 0.562
ENSCHAP00000062619
Solute carrier family 38 member 11.
    
 
 0.482
LOC105894294
Epithelial membrane protein 3-like.
   
  
 0.479
ENSCHAP00000048424
annotation not available
    
 
 0.472
ENSCHAP00000039820
annotation not available
  
 
  0.440
LOC105891002
Galectin-3-like.
   
 0.431
ENSCHAP00000031912
Lectin, galactoside binding soluble 3b.
   
 0.431
ENSCHAP00000053014
annotation not available
   
 0.431
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.