STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000046350Low density lipoprotein receptor-related protein 10. (770 aa)    
Predicted Functional Partners:
RELN
Reelin.
    
 0.717
ENSCHAP00000042752
Low density lipoprotein receptor-related protein associated protein 1.
    
 0.717
ENSCHAP00000016490
Intersectin 2b.
    
 0.703
ENSCHAP00000057857
Intersectin 2a.
    
 0.703
ENSCHAP00000016391
Macrophage stimulating 1 receptor b.
    
  0.690
ENSCHAP00000041906
Macrophage stimulating 1 receptor a.
    
  0.690
ENSCHAP00000053649
MET proto-oncogene, receptor tyrosine kinase.
    
  0.690
LOC105901460
Apolipoprotein Eb-like.
    
 0.636
ENSCHAP00000026418
Corin, serine peptidase.
    
0.632
sacm1l
SAC1 like phosphatidylinositide phosphatase.
    
 0.632
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.