STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000046375annotation not available (689 aa)    
Predicted Functional Partners:
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.953
kif3a
Kinesin family member 3A.
    
 0.843
ENSCHAP00000042446
Kinesin family member 5A, a.
   
 0.839
ENSCHAP00000040986
Kinesin-associated protein 3a.
     
 0.838
ENSCHAP00000010024
Kinesin light chain 1a.
  
  
 
0.828
ENSCHAP00000000579
Kinesin light chain 3.
  
  
 
0.827
ENSCHAP00000033455
annotation not available
  
  
 
0.826
KIF5C
Kinesin family member 5C.
   
 0.820
ENSCHAP00000011428
Kinesin family member 5B, a.
   
 0.820
ENSCHAP00000030873
Kinesin family member 5B, a.
   
 0.820
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.