STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000046424Si:dkey-26i13.7. (415 aa)    
Predicted Functional Partners:
chst11
Carbohydrate sulfotransferase 11.
  
  
 
0.831
CHST13
Carbohydrate sulfotransferase 13.
  
  
 
0.706
LOC105894326
Carbohydrate sulfotransferase 11-like.
  
  
 
0.705
dcn
Decorin.
     
 0.666
ENSCHAP00000011380
Brevican.
     
 0.626
ENSCHAP00000010683
beta-1,4-N-acetyl-galactosaminyl transferase 4b.
     
 0.623
ENSCHAP00000007480
Chondroitin sulfate N-acetylgalactosaminyltransferase 1a.
     
 0.618
ENSCHAP00000038327
Chondroitin sulfate N-acetylgalactosaminyltransferase 1b.
     
 0.618
chst10
Carbohydrate sulfotransferase 10.
     
0.608
ENSCHAP00000025279
Chondroitin sulfate synthase 3.
     
 0.546
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.