STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bin3Bridging integrator 3. (258 aa)    
Predicted Functional Partners:
LOC105910950
Growth arrest-specific protein 7-like.
   
 0.770
ENSCHAP00000050573
annotation not available
   
 0.770
ENSCHAP00000007471
Peroxisomal biogenesis factor 3.
   
 0.727
ENSCHAP00000008142
DEAD (Asp-Glu-Ala-Asp) box polypeptide 20.
    
  0.706
LOC105902776
Dynamin-1-like protein.
    
 0.672
ENSCHAP00000015036
Dynamin 1a.
    
 0.672
ENSCHAP00000021135
annotation not available
    
 0.672
ENSCHAP00000026379
annotation not available
    
 0.672
ENSCHAP00000026822
annotation not available
    
 0.672
ENSCHAP00000029334
annotation not available
    
 0.672
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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