STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000046708annotation not available (238 aa)    
Predicted Functional Partners:
ENSCHAP00000038634
Tumor necrosis factor receptor superfamily, member 11a, NFKB activator.
    
 0.980
TNFRSF11B
TNF receptor superfamily member 11b.
    
 0.979
ENSCHAP00000000392
annotation not available
   
 0.787
ENSCHAP00000046645
TNF superfamily member 13b.
   
 0.764
ENSCHAP00000023415
annotation not available
   
 0.736
ENSCHAP00000023891
annotation not available
   
 0.736
ENSCHAP00000023161
annotation not available
   
 0.735
ENSCHAP00000000448
annotation not available
    
 0.731
TNFRSF6B
TNF receptor superfamily member 6b.
    
 0.731
ENSCHAP00000022189
annotation not available
    
 0.731
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.