STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000046812annotation not available (255 aa)    
Predicted Functional Partners:
ENSCHAP00000003979
Tubulin, alpha 8 like.
    
  0.822
ENSCHAP00000017150
Poly (ADP-ribose) polymerase 1.
   
  0.820
casp3
Caspase 3.
    
 0.819
ENSCHAP00000054780
Caspase 10, apoptosis-related cysteine peptidase.
    
 0.816
ENSCHAP00000015502
Lamin L3.
    
 0.808
lmnb1
Lamin B1.
    
 0.808
lmnb2
Lamin B2.
    
 0.805
ENSCHAP00000018573
Poly (ADP-ribose) polymerase family, member 3.
   
 
  0.804
casp7
Caspase 7.
    
 0.785
LOC105911205
Caspase-7-like.
    
 0.782
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.