STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000047210annotation not available (166 aa)    
Predicted Functional Partners:
ENSCHAP00000044365
annotation not available
   
 0.998
osgepl1
O-sialoglycoprotein endopeptidase like 1.
   
 0.994
ENSCHAP00000059024
TP53 regulating kinase.
   
 0.992
tprkb
TP53RK binding protein.
    
 0.991
nup43
Nucleoporin 43.
    
   0.740
ENSCHAP00000053681
annotation not available
      
 0.523
ENSCHAP00000016388
DEAD (Asp-Glu-Ala-Asp) box polypeptide 46.
    
 
 0.522
yrdc
yrdC N6-threonylcarbamoyltransferase domain containing.
      
 0.521
ENSCHAP00000052191
Si:ch211-153b23.4.
      
 0.521
nfyb
Nuclear transcription factor Y subunit beta.
    
 
 0.404
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.