STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000047470annotation not available (246 aa)    
Predicted Functional Partners:
ENSCHAP00000054324
Sortilin-related receptor, L(DLR class) A repeats containing.
    
 0.633
ENSCHAP00000034081
Protein tyrosine kinase 7a.
    
  0.601
PTK7
Protein tyrosine kinase 7 (inactive).
    
  0.601
ENSCHAP00000000139
annotation not available
    
  0.581
ENSCHAP00000026518
Neurotrophin 3.
    
  0.581
ENSCHAP00000057780
Nerve growth factor a (beta polypeptide).
    
  0.581
ENSCHAP00000015988
Nerve growth factor receptor a (TNFR superfamily, member 16).
    
  0.529
LOC105909845
Nerve growth factor-like.
     
 0.497
ENSCHAP00000011904
Brain-derived neurotrophic factor.
     
 0.495
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.