STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000047530SRSF protein kinase 1a. (695 aa)    
Predicted Functional Partners:
srsf5
Serine and arginine rich splicing factor 5.
    
 0.940
ENSCHAP00000013566
Serine and arginine rich splicing factor 5b.
    
 0.939
SRSF4
Serine and arginine rich splicing factor 4.
    
 0.939
srsf1
Serine and arginine rich splicing factor 1.
    
 0.933
srsf9
Serine and arginine rich splicing factor 9.
    
 0.928
srsf3
Serine and arginine rich splicing factor 3.
    
 0.905
ENSCHAP00000006979
annotation not available
    
 0.899
LOC105901301
Serine/arginine-rich splicing factor 2-like.
    
 0.899
ENSCHAP00000046927
Serine and arginine rich splicing factor 6a.
    
 0.894
ENSCHAP00000060579
annotation not available
    
 0.894
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.