STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000047765annotation not available (527 aa)    
Predicted Functional Partners:
cenpf
Centromere protein F.
   
 0.708
nek6
NIMA related kinase 6.
    
 0.686
nek7
NIMA related kinase 7.
    
 0.686
ENSCHAP00000043849
NIMA-related kinase 2.
   
 
 0.577
ENSCHAP00000020403
Discs, large (Drosophila) homolog-associated protein 5.
   
  
 0.556
ENSCHAP00000038482
Ttk protein kinase.
   
  
 0.545
ENSCHAP00000033089
Nucleolar and spindle associated protein 1.
   
  
 0.520
ENSCHAP00000040759
annotation not available
   
 
 0.517
ENSCHAP00000061090
Rho GTPase activating protein 11A.
   
   0.516
ENSCHAP00000009160
RAN binding protein 2.
   
  0.512
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.