STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000047769NPR2 like, GATOR1 complex subunit. (402 aa)    
Predicted Functional Partners:
ENSCHAP00000028370
WD repeat domain 24.
    
 0.999
ENSCHAP00000028620
DEP domain containing 5, GATOR1 subcomplex subunit.
    
 0.999
ENSCHAP00000036264
Missing oocyte, meiosis regulator, homolog (Drosophila).
    
 0.999
nprl3
NPR3 like, GATOR1 complex subunit.
    
 0.999
seh1l
SEH1 like nucleoporin.
   
 0.999
wdr59
WD repeat domain 59.
    
 0.999
LOC105906309
Ras-related GTP-binding protein A.
    
 0.997
sec13
SEC13 homolog, nuclear pore and COPII coat complex component.
    
 0.995
SZT2
SZT2 subunit of KICSTOR complex.
    
 0.995
ENSCHAP00000032675
Kaptin (actin binding protein).
   
 0.992
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.