STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plxna4Plexin A4. (1908 aa)    
Predicted Functional Partners:
ENSCHAP00000028648
Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E.
    
 0.829
ENSCHAP00000053646
Neuropilin 1a.
    
 0.798
ENSCHAP00000008673
Semaphorin 7A.
    
 0.797
ENSCHAP00000040370
Sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A.
    
0.792
sema3g
Semaphorin 3G.
    
 0.752
LOC105891990
semaphorin-6D-like.
    
0.745
ENSCHAP00000027706
Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Ab.
    
 0.696
ENSCHAP00000001732
annotation not available
    
 0.688
ENSCHAP00000011235
Si:ch211-113g11.6.
    
0.688
LOC105910853
semaphorin-4E-like.
    
0.665
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.