STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000047907Cytoplasmic polyadenylation element binding protein 4a. (739 aa)    
Predicted Functional Partners:
ENSCHAP00000012423
Polo-like kinase 1 (Drosophila).
    
 0.882
cdk1
Cyclin dependent kinase 1.
    
 0.874
ENSCHAP00000020104
Aurora kinase A.
    
 0.871
cntd2
Cyclin N-terminal domain containing 2.
   
 
 0.852
ENSCHAP00000026300
Cyclin B2.
   
 
 0.852
ENSCHAP00000016765
Aurora kinase B.
    
 0.850
ENSCHAP00000048076
Cytoplasmic polyadenylation element binding protein 1b.
   
0.773
ENSCHAP00000052842
annotation not available
    
 0.763
plk3
Polo like kinase 3.
    
 0.763
ENSCHAP00000059623
Polo-like kinase 2b (Drosophila).
    
 0.763
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.