STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105899323Glutaminase kidney isoform, mitochondrial-like. (612 aa)    
Predicted Functional Partners:
gad2
Glutamate decarboxylase 2.
  
 
 0.877
LOC105900485
Glutamate decarboxylase 1-like.
  
 
 0.872
ENSCHAP00000048783
Glutamate dehydrogenase 1a.
     
 0.868
ENSCHAP00000048265
Glutamate-ammonia ligase (glutamine synthase) a.
    
 0.866
ENSCHAP00000056641
Glutamate-ammonia ligase (glutamine synthase) c.
    
 0.866
aldh18a1
Aldehyde dehydrogenase 18 family member A1.
    
 0.865
ENSCHAP00000010007
Aldehyde dehydrogenase 18 family, member A1.
    
 0.865
ENSCHAP00000061642
5-oxoprolinase, ATP-hydrolysing.
     
 0.865
LOC105904123
Glutamate dehydrogenase, mitochondrial.
     
 0.855
ENSCHAP00000000677
Aldehyde dehydrogenase 4 family, member A1.
    
 0.852
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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