STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000048005Rho guanine nucleotide exchange factor (GEF) 10. (1464 aa)    
Predicted Functional Partners:
ENSCHAP00000015688
Stimulator of interferon response cGAMP interactor 1.
   
 0.835
ENSCHAP00000037425
Tumor protein p53 binding protein, 1.
    
 0.763
ENSCHAP00000005643
Rho guanine nucleotide exchange factor (GEF) 1b.
    
 0.601
ENSCHAP00000011881
Rho guanine nucleotide exchange factor (GEF) 12b.
    
 0.601
ENSCHAP00000046529
Pleckstrin homology domain containing, family G (with RhoGef domain) member 7.
    
 0.553
ENSCHAP00000015584
Rho/rac guanine nucleotide exchange factor (GEF) 2.
    
 0.517
ENSCHAP00000062670
Rho guanine nucleotide exchange factor (GEF) 38.
     
0.510
ENSCHAP00000043876
Rho guanine nucleotide exchange factor (GEF) 1a.
    
 0.509
ENSCHAP00000007145
annotation not available
    
 0.498
ENSCHAP00000007169
annotation not available
    
 0.498
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.