STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000048013Mitogen-activated protein kinase kinase kinase 7. (588 aa)    
Predicted Functional Partners:
myd88
MYD88 innate immune signal transduction adaptor.
   
 0.996
tab1
TGF-beta activated kinase 1 (MAP3K7) binding protein 1.
  
 0.996
ENSCHAP00000001336
TGF-beta activated kinase 1 (MAP3K7) binding protein 3.
   
 0.995
ENSCHAP00000033351
TNF receptor-associated factor 6.
    
 0.994
TRAF6
TNF receptor-associated factor 6-like.
    
 0.994
ENSCHAP00000005542
TGF-beta activated kinase 1 (MAP3K7) binding protein 2.
   
 0.988
ENSCHAP00000023227
Tumor necrosis factor receptor superfamily, member 1a.
   
 0.987
ENSCHAP00000007881
Toll-like receptor 4b, duplicate a.
   
 0.986
ikbkb
Inhibitor of nuclear factor kappa B kinase subunit beta.
   
0.986
UBE2N
Ubiquitin conjugating enzyme E2 N.
   
 0.984
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.