STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dr1Down-regulator of transcription 1. (176 aa)    
Predicted Functional Partners:
ENSCHAP00000028660
DR1-associated protein 1 (negative cofactor 2 alpha).
   
 0.999
pole3
DNA polymerase epsilon 3, accessory subunit.
   
0.997
ENSCHAP00000003329
Lysine acetyltransferase 14.
    
 0.995
ENSCHAP00000001031
YEATS domain containing 2.
    
 0.994
tada2a
Transcriptional adaptor 2A.
    
 0.994
ENSCHAP00000014062
MAP3K12 binding inhibitory protein 1.
   
 0.993
ENSCHAP00000019780
SAGA complex associated factor 29.
    
 0.991
ENSCHAP00000012205
Transcriptional adaptor 2B.
    
 0.987
ENSCHAP00000058207
WD repeat domain 5.
   
 0.980
ENSCHAP00000028179
Zinc finger, ZZ-type containing 3.
    
 0.976
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.