STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105904045Polyadenylate-binding protein-interacting protein 2B-like. (131 aa)    
Predicted Functional Partners:
ENSCHAP00000041229
Ubiquitin protein ligase E3 component n-recognin 5.
    
 
 0.516
pabpc1
poly(A) binding protein cytoplasmic 1.
    
 
 0.506
PABPC3
poly(A) binding protein cytoplasmic 3.
    
 
 0.506
ENSCHAP00000046918
poly(A) binding protein, cytoplasmic 4 (inducible form).
    
 
 0.506
LOC105911096
Polyadenylate-binding protein 5-like.
    
 
 0.504
ENSCHAP00000061361
Nucleolin.
    
 
 0.504
ANKRD52
Ankyrin repeat domain 52.
      
 0.439
ENSCHAP00000042652
annotation not available
      
 0.431
ENSCHAP00000024716
Eukaryotic translation initiation factor 4 gamma, 3b.
    
 
 0.428
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.