STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000048414Nuclear transport factor 2-like export factor 2. (143 aa)    
Predicted Functional Partners:
ENSCHAP00000022511
annotation not available
    
 0.994
LOC105900387
Nuclear RNA export factor 1-like.
    
 0.994
ENSCHAP00000009160
RAN binding protein 2.
   
 0.991
nutf2
Nuclear transport factor 2.
   
 
 0.957
LOC105903949
Nuclear pore glycoprotein p62-like.
    
 0.952
NUP54
Nucleoporin 54.
   
 
 0.936
nup35
Nucleoporin 35.
   
 
 0.935
ENSCHAP00000003421
Nucleoporin 153.
     
 0.913
ENSCHAP00000040692
Ribonucleic acid export 1.
   
 
 0.888
ENSCHAP00000006895
annotation not available
    
 0.881
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.