STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000048435Bloodthirsty-related gene family, member 1. (571 aa)    
Predicted Functional Partners:
ENSCHAP00000030291
Ubiquitin B.
    
  0.585
rps27a
Ribosomal protein S27a.
    
  0.579
ENSCHAP00000017836
Interferon regulatory factor 3.
   
 0.561
LOC105910950
Growth arrest-specific protein 7-like.
    
  0.459
ENSCHAP00000050573
annotation not available
    
  0.459
ENSCHAP00000030795
annotation not available
    
 0.428
ENSCHAP00000030831
ISG15 ubiquitin like modifier.
    
 0.428
ENSCHAP00000040442
annotation not available
    
 0.428
supt16h
SPT16 homolog, facilitates chromatin remodeling subunit.
    
 0.424
ENSCHAP00000045730
Zinc finger, AN1-type domain 4.
    
  0.422
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.