STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000048586annotation not available (218 aa)    
Predicted Functional Partners:
ENSCHAP00000009070
Cbl proto-oncogene C, E3 ubiquitin protein ligase.
    
 0.620
ENSCHAP00000018491
Cbl proto-oncogene B, E3 ubiquitin protein ligase.
    
 0.620
ENSCHAP00000025157
Cbl proto-oncogene, E3 ubiquitin protein ligase.
    
 0.620
gab1
GRB2 associated binding protein 1.
    
 0.605
HGFAC
HGF activator.
    
  0.508
ENSCHAP00000038619
annotation not available
    
  0.508
HABP2
Hyaluronan binding protein 2.
    
  0.508
ENSCHAP00000034081
Protein tyrosine kinase 7a.
    
 0.493
PTK7
Protein tyrosine kinase 7 (inactive).
    
 0.493
ENSCHAP00000000773
Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3H.
    
 0.492
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.