STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105892033Lysophosphatidylcholine acyltransferase 1-like. (532 aa)    
Predicted Functional Partners:
ENSCHAP00000012489
Lysophosphatidylcholine acyltransferase 3.
     
 0.888
lpcat4
Lysophosphatidylcholine acyltransferase 4.
  
 
0.888
ENSCHAP00000003328
Choline phosphotransferase 1.
     
 0.884
crls1
Cardiolipin synthase 1.
  
 
 0.880
LOC105894475
Platelet-activating factor acetylhydrolase-like.
     
 0.878
ENSCHAP00000031823
Phospholipase A2, group XV.
    
 0.875
pemt
Phosphatidylethanolamine N-methyltransferase.
     
 0.871
ENSCHAP00000043885
Lysophosphatidylglycerol acyltransferase 1.
     
 0.871
ENSCHAP00000008802
Choline/ethanolamine phosphotransferase 1b.
     
 0.868
ENSCHAP00000028313
annotation not available
    
 0.866
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.