STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105891340Peroxiredoxin-1. (265 aa)    
Predicted Functional Partners:
ENSCHAP00000000573
Sulfiredoxin 1 homolog (S. cerevisiae).
   
 0.986
prdx5
Peroxiredoxin 5.
   
 0.932
ENSCHAP00000049610
annotation not available
  
 0.931
ENSCHAP00000058691
NME/NM23 family member 8.
  
 0.931
LOC105903933
Thioredoxin-like.
  
 0.919
TXN
Thioredoxin-like.
  
 0.919
txn2
Thioredoxin 2.
  
 0.893
eef1g
Eukaryotic translation elongation factor 1 gamma.
   
 0.893
ENSCHAP00000052840
Superoxide dismutase 2, mitochondrial.
  
 
 0.851
ENSCHAP00000013480
annotation not available
  
 0.844
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.