STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000048679Ribonuclease P/MRP 25 subunit-like. (227 aa)    
Predicted Functional Partners:
rpp30
Ribonuclease P/MRP subunit p30.
    
 0.993
ENSCHAP00000053314
Ribonuclease P 21 subunit.
   
 0.990
pop5
POP5 homolog, ribonuclease P/MRP subunit.
   
 0.989
pop4
POP4 homolog, ribonuclease P/MRP subunit.
    
 0.988
pop7
POP7 homolog, ribonuclease P/MRP subunit.
    
 0.987
ENSCHAP00000005016
Ribonuclease P/MRP 38 subunit.
   
 0.984
POP1
POP1 homolog, ribonuclease P/MRP subunit.
    
 0.983
nhp2
NHP2 ribonucleoprotein.
    
 0.955
dkc1
Dyskerin pseudouridine synthase 1.
     
 0.935
gar1
GAR1 ribonucleoprotein.
   
 
 0.933
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.