STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105911889LIM and senescent cell antigen-like-containing domain protein 1. (362 aa)    
Predicted Functional Partners:
rsu1
Ras suppressor protein 1.
   
 0.989
parvb
Parvin beta.
   
 0.914
PARVA
Parvin alpha.
   
 0.914
LOC105910371
Alpha-parvin.
   
 0.914
ENSCHAP00000046881
Parvin, gamma.
   
 0.876
ENSCHAP00000010559
P53-induced death domain protein 1.
    
 0.807
pop7
POP7 homolog, ribonuclease P/MRP subunit.
   
 0.792
tmem203
Transmembrane protein 203.
   
 0.792
ENSCHAP00000007458
Fermitin family member 1.
   
 
 0.644
fermt2
Fermitin family member 2.
   
 
 0.644
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.