STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000048812Guanine deaminase. (457 aa)    
Predicted Functional Partners:
aprt
Adenine phosphoribosyltransferase.
    
 0.928
ENSCHAP00000042641
Xanthine dehydrogenase.
 
 
 0.922
TYMP
Thymidine phosphorylase.
    
 0.907
gldc
Glycine decarboxylase.
 
 
 
 0.905
LOC105895195
Inosine-uridine preferring nucleoside hydrolase-like.
  
 
 0.903
ENSCHAP00000017358
Si:dkey-4e7.3.
  
 
 0.903
ENSCHAP00000020641
Hypoxanthine phosphoribosyltransferase 1.
    
 0.900
ENSCHAP00000020429
Purine nucleoside phosphorylase 4b.
  
 
 0.898
ENSCHAP00000023697
Formimidoyltransferase cyclodeaminase.
  
 
 0.898
LOC105912247
Purine nucleoside phosphorylase-like.
  
 
 0.898
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.