STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ppil6Peptidylprolyl isomerase like 6. (1429 aa)    
Predicted Functional Partners:
ENSCHAP00000048910
Leucine-rich repeats and guanylate kinase domain containing.
  
 0.984
atp5f1c
ATP synthase F1 subunit gamma.
   
 
 0.965
atp5po
ATP synthase peripheral stalk subunit OSCP.
  
 
 0.952
atp5f1a
methyl-CpG-binding domain protein 2-like.
  
 
 0.950
aprt
Adenine phosphoribosyltransferase.
  
 
 0.944
ENSCHAP00000049610
annotation not available
  
 0.943
ENSCHAP00000058691
NME/NM23 family member 8.
  
 0.943
cmpk2
Cytidine/uridine monophosphate kinase 2.
    
 0.939
ak8
Adenylate kinase 8.
   
0.939
dtymk
Deoxythymidylate kinase.
    
 0.939
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.