STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000049108G protein-coupled receptor 39. (407 aa)    
Predicted Functional Partners:
ENSCHAP00000039757
Ghrelin/obestatin prepropeptide.
    
 0.708
ENSCHAP00000052663
annotation not available
    
 0.686
ENSCHAP00000016183
Guanine nucleotide binding protein (G protein), alpha 15 (Gq class), tandem duplicate 3.
    
  0.674
ENSCHAP00000055455
annotation not available
    
 0.667
LOC105889474
Guanine nucleotide-binding protein subunit alpha-11.
    
 0.660
ENSCHAP00000053577
Guanine nucleotide binding protein (G protein), alpha 14a.
    
 0.660
ptafr
Platelet activating factor receptor.
     
0.648
grk3
G protein-coupled receptor kinase 3.
    
  0.612
grk1
G protein-coupled receptor kinase 1.
    
  0.612
LOC105889975
G protein-coupled receptor kinase 5-like.
    
  0.612
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.