STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000049222Methylsterol monooxygenase 1. (314 aa)    
Predicted Functional Partners:
LOC105904925
Lanosterol 14-alpha demethylase.
   
 0.977
sc5d
sterol-C5-desaturase.
   
 0.976
hsd17b7
Hydroxysteroid 17-beta dehydrogenase 7.
   
 0.975
tm7sf2
Transmembrane 7 superfamily member 2.
   
 0.950
ENSCHAP00000004587
Lamin B receptor.
   
 0.937
ENSCHAP00000004017
Farnesyl-diphosphate farnesyltransferase 1.
  
 0.928
ENSCHAP00000005887
Squalene epoxidase b.
   
 0.928
sqle
Squalene epoxidase.
   
 0.928
ENSCHAP00000010211
Sigma non-opioid intracellular receptor 1.
   
 0.925
ENSCHAP00000000481
annotation not available
   
 0.904
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.