STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rnf26Ring finger protein 26. (463 aa)    
Predicted Functional Partners:
ENSCHAP00000043714
Transmembrane protein 33.
    
 
 0.598
UBA3
Ubiquitin like modifier activating enzyme 3.
     
 0.561
LOC105912256
NEDD8-activating enzyme E1 catalytic subunit.
     
 0.561
rps25
Ribosomal protein S25.
      
 0.535
TMEM43
Transmembrane protein 43.
    
 
 0.504
tollip
Toll interacting protein.
    
 
 0.475
upk2
Uroplakin 2.
    
 
 0.473
LOC105895365
Glucose-6-phosphate translocase-like.
      
 0.443
slc37a4
Solute carrier family 37 member 4.
      
 0.443
LOC105891737
Forkhead box protein N5-like.
    
 
 0.435
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.