STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000049413Si:dkey-118k5.3. (916 aa)    
Predicted Functional Partners:
ENSCHAP00000042107
annotation not available
  
 
  0.528
LOC105890847
G-protein coupled receptor 4-like.
  
     0.502
ENSCHAP00000042011
Zgc:136930.
  
 
   0.495
ENSCHAP00000009160
RAN binding protein 2.
   
 
  0.489
LOC105911982
Thread biopolymer filament subunit gamma-like.
  
 
   0.487
ENSCHAP00000006158
Si:dkey-183i3.5.
  
 
  0.486
ENSCHAP00000027672
Uroplakin 3b.
  
     0.478
rps27a
Ribosomal protein S27a.
    
  0.446
ENSCHAP00000058142
annotation not available
  
 
  0.442
ENSCHAP00000000755
annotation not available
  
 
  0.429
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.