STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000049655Phosphatidylinositol glycan anchor biosynthesis, class F. (159 aa)    
Predicted Functional Partners:
ENSCHAP00000006133
Phosphatidylinositol glycan anchor biosynthesis class G.
    
 0.992
pigo
Phosphatidylinositol glycan anchor biosynthesis class O.
    
 0.943
pigk
Phosphatidylinositol glycan anchor biosynthesis class K.
   
 
 0.934
ENSCHAP00000039826
Phosphatidylinositol glycan anchor biosynthesis, class B.
     
 0.931
pigt
Phosphatidylinositol glycan anchor biosynthesis class T.
     
 0.925
pigs
Phosphatidylinositol glycan anchor biosynthesis class S.
     
 0.895
ENSCHAP00000039971
Glycosylphosphatidylinositol anchor attachment 1.
     
 0.886
ENSCHAP00000001392
Serine palmitoyltransferase, long chain base subunit 1.
     
 0.870
pigu
Phosphatidylinositol glycan anchor biosynthesis class U.
     
 0.870
kdsr
3-ketodihydrosphingosine reductase.
   
 
  0.853
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.