STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000050126annotation not available (375 aa)    
Predicted Functional Partners:
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.953
ENSCHAP00000050861
Anaphase promoting complex subunit 4.
    
 0.759
cdc16
Cell division cycle 16.
    
 0.723
ENSCHAP00000034363
PAF1 homolog, Paf1/RNA polymerase II complex component.
    
 0.720
ENSCHAP00000042014
Anaphase promoting complex subunit 1.
    
 0.719
anapc5
Anaphase promoting complex subunit 5.
    
 0.711
ENSCHAP00000025718
Glyoxylate reductase 1 homolog (Arabidopsis).
    
 0.698
ENSCHAP00000059282
Anaphase promoting complex subunit 2.
    
 0.697
anapc16
Anaphase promoting complex subunit 16.
    
  0.692
has1
Hyaluronan synthase 1.
  
 0.683
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.