STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000050411Cytochrome c oxidase assembly factor COX18. (361 aa)    
Predicted Functional Partners:
mrpl45
Mitochondrial ribosomal protein L45.
   
 
 0.929
srpra
SRP receptor subunit alpha.
  
 
 0.922
LOC105900835
Cytochrome c oxidase assembly protein COX15 homolog.
     
 0.911
LOC105904489
39S ribosomal protein L23, mitochondrial-like.
   
 
 0.886
mrps9
Mitochondrial ribosomal protein S9.
  
   0.877
ENSCHAP00000000372
Mitochondrial ribosomal protein L12.
   
 
 0.860
mrpl58
Mitochondrial ribosomal protein L58.
  
 
 0.853
mrpl2
Mitochondrial ribosomal protein L2.
   
 
 0.849
ENSCHAP00000010615
Mitochondrial ribosomal protein L4.
   
 
 0.837
ENSCHAP00000003439
annotation not available
  
 
 0.835
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.